Articulo de referencia

Streptomycetaceae

{{cite journal | author = Cavalier-Smith T. | title = The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification | jour...

Streptomycetaceae es una familia del orden Streptomycetales . Incluye el importante género Streptomyces . Este fue el origen de muchos antibióticos , en particular la estreptomicina , el primer antibiótico contra la tuberculosis .

Genómica

Sequence alignments of actinomycetotal genomes have led to the identification of three conserved signature indels which are unique to the order Streptomycetales. The enzyme PBGD contains a four-amino-acid insertion which is present in all Streptomyces species and Kitasatospora setae, but not any other Actinomycetota. Similarly, a one- amino-acid insertion is present in a conserved region of adenylate kinase and is found in all Streptomyces species and K. setae, but is not found in any other Actinomycetota. Five conserved signature proteins have also been identified which are present in various sequenced Streptomyces species, but not in K. setae; however, as the complete genome of K. setae has not yet been sequenced, these proteins may be present in K. setae. Additionally, 11 conserved signature proteins have been identified which are found in all sequenced Streptomyces species and K. setae. These proteins are believed to be unique to the Streptomycetales order, thus provide molecular markers which can be used to distinguish this group from the rest of the Actinomycetota. Phylogenetic trees indicate that the order Catenulisporales is closely related to the order Streptomycetales. This inference is supported by a one-amino-acid conserved signature indel which is uniquely found in all Streptomycetales species and Catenulisporales acidiphilia, the only Catenulisporales species whose complete genome has been sequenced. Additionally, three conserved signature proteins have been identified which are found in all Streptomycetales species and C. acidiphilia. Both the conserved signature indel and the conserved signature proteins provide evidence that the orders Streptomycetales and Catenulisporales are closely related.[5]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI).[4]

Notas

  1. Allostreptomyces no está incluido en este árbol filogenético.

Genera incertae sedis: [ 3 ]

Véase también

Referencias

  1. Cavalier-Smith T. (2002). "El origen neomurano de las arqueobacterias, la raíz negibacteriana del árbol universal y la megaclasificación bacteriana" . Int J Syst Evol Microbiol . 52 (Pt 1): 7–76 . doi : 10.1099/00207713-52-1-7 . PMID 11837318 . 
  2. Waksman SA, Henrici AT (1943). " La nomenclatura y clasificación de los actinomicetos " . J Bacteriol . 46 (4): 337– 341. doi : 10.1128/jb.46.4.337-341.1943 . PMC 373826. PMID 16560709. S2CID 8824754 .   
  3. 1 2 3 Streptomycetaceae en LPSN ; Freese, HM; Meier-Kolthoff, JP; Sardà Carbasse, J.; Afolayan, AO; Göker, M. (29 de octubre de 2025). "TYGS y LPSN en 2025: un recurso global de datos biológicos básicos para la clasificación y nomenclatura basadas en el genoma de procariotas dentro de la Diversidad Digital de DSMZ". Nucleic Acids Research . 53 : D1– D12. doi : 10.1093/nar/gkaf1110 .
  4. 1 2 C.L. Schoch; et al. "Streptomycetaceae" . Base de datos taxonómica del Centro Nacional de Información Biotecnológica (NCBI) . Recuperado el 28 de febrero de 2025 . 
  5. Gao, B.; Gupta, RS (2012). "Marco filogenético y firmas moleculares para los principales clados del filo Actinobacteria" . Microbiology and Molecular Biology Reviews . 76 (1): 66– 112. doi : 10.1128/MMBR.05011-11 . PMC 3294427. PMID 22390973 .  
  6. Nouioui I, Carro L, García-López M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Markus Göker M (2018). " Clasificación taxonómica basada en el genoma del filo Actinobacteria " . Front. Microbiol . 9 : 2007. doi : 10.3389/fmicb.2018.02007 . PMC 6113628. PMID 30186281 .  
  7. "El LTP" . Consultado el 10 de diciembre de 2024 .
  8. "Árbol LTP_all en formato newick" . Consultado el 10 de diciembre de 2024 .
  9. "Notas de la versión LTP_10_2024" (PDF) . Consultado el 10 de diciembre de 2024 .
  10. "GTDB versión 10-RS226" . Base de datos de taxonomía del genoma . Consultado el 1 de mayo de 2025 .
  11. "bac120_r226.sp_label" . Base de datos de taxonomía del genoma . Consultado el 1 de mayo de 2025 .
  12. "Historial de taxones" . Base de datos de taxonomía del genoma . Consultado el 1 de mayo de 2025 .
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